Computational Biology and Evolution lab.
We are in the Department of Computer Science of the Université du Québec à Montréal (UQAM
) and associated with the LACIM
. Our research focuses on Computational Biology and Evolution, particularly the design of new algorithms to study RNA molecules and viral infections.
I am looking for students at all levels. Contact me with a cover letter on your background and motivation to pursue research, a CV as well as your transcripts.
I have funded PhD positions available. The project is on new algorithms to study RNA 3D structures.
Prof.From really close
In proceedings of the , , ,
Softwares and Web servers
Organized collection of RNA Recurrent Interaction Networks (RIN), can annotate any structure file.
Predict a small molecule binding profile (molecular fingerprint) given an RNA base-pairing pattern.
Automatic identification of 3D structural modules in RNA sequences.
Prediction of local 3D motifs from RNA secondary structure predictions.
Prediction of RNA-binding interfaces using SHAPE data and MSA.
Design of RNA sequences folding into target secondary structures with nucleotide distribution.
Reconstruction of ancestral RNA sequences under multiple structural constraints.
Error-correction of RNA sequencing data using secondary structure information.
Fragment-based design of RNA sequences.
reinharz.vladimir [at] uqam.ca
Phone: +1 (514) 987-3000 ext.8214
Fax: +1 (514) 987-8477
201, av. Président-Kennedy
Mail should be sent to
Université du Québec à Montréal
Case postale 8888, Succursale Centre-ville
Montréal (Québec) H3C 3P8 Canada
- Jonathan Monahan, BSc, 2021 (Stornoway Diamonds)
- Tarek Boutros, BSc, 2020
- Linda Tchombe Nwegang, DESS, 2020